Publications

Publications

Alisafaei, F., Mandal, K., Saldanha, R., Swoger, M., Yang, H., Shi, X., Guo, M., Hehnly, H., Castañeda, C. A., Janmey, P. A., Patteson, A. E., & Shenoy, V. B. (2024). Vimentin is a key regulator of cell mechanosensing through opposite actions on actomyosin and microtubule networks. Communications Biology, 7(1), 658. https://doi.org/10.1038/s42003-024-06366-4

Alisafaei, F., Mandal, K., Saldanha, R., Swoger, M., Yang, H., Shi, X., Guo, M., Hehnly, H., Castañeda, C. A., Janmey, P. A., Patteson, A. E., & Shenoy, V. B. (2024). Vimentin is a key regulator of cell mechanosensing through opposite actions on actomyosin and microtubule networks. Communications Biology, 7(1), 658. https://doi.org/10.1038/s42003-024-06366-4

Boyle, M. J., Radhakrishnan, R., & Composto, R. J. (2024). Molecular Dynamics Study of the Effect of Grafting Density on Ion Diffusivity in a MARTINI Coarse-Grained Strong Polyelectrolyte Brush. Macromolecules. https://doi.org/10.1021/acs.macromol.4c01018

Boyle, M. J., Radhakrishnan, R., & Composto, R. J. (2024). Molecular Dynamics Study of the Effect of Grafting Density on Ion Diffusivity in a MARTINI Coarse-Grained Strong Polyelectrolyte Brush. Macromolecules. https://doi.org/10.1021/acs.macromol.4c01018

Chen, B., He, B., Tucker, A. M., Biluck, I., Leung, T. H., Schaer, T. P., & Yang, S. (2024). An Environmentally Stable, Biocompatible, and Multilayered Wound Dressing Film with Reversible and Strong Adhesion. Advanced Healthcare Materials, n/a(n/a), 2400827. https://doi.org/https://doi.org/10.1002/adhm.202400827

Chen, B., He, B., Tucker, A. M., Biluck, I., Leung, T. H., Schaer, T. P., & Yang, S. (2024). An Environmentally Stable, Biocompatible, and Multilayered Wound Dressing Film with Reversible and Strong Adhesion. Advanced Healthcare Materials, n/a(n/a), 2400827. https://doi.org/10.1002/adhm.202400827

Cottone, A. M., Jeong, A., Nguyen, Y., McGonigle, J., Rosario, M., & Wells, R. (2024). Examining design features of a Research Experience for Teachers in mechanobiology towards promoting K-12 STEM integration. Proceedings of the 18th International Conference of the Learning Sciences. , 1670-1673.

Cottone, A. M., Jeong, A., Nguyen, Y., McGonigle, J., Rosario, M., & Wells, R. (2024). Examining design features of a Research Experience for Teachers in mechanobiology towards promoting K-12 STEM integration. Proceedings of the 18th International Conference of the Learning Sciences. , 1670-1673. https://repository.isls.org/bitstream/1/10780/1/ICLS2024_1670-1673.pdf

Ewoldt, J. K., Wang, M.C., McLellan, M.A., Cloonan, P.E., Chopra, A., Gorham, J., Li, L., DeLaughter, D.M., Gao, X., Lee, J.H., Willcox J.A.L., Layton, O., Luu, R.J., Toepfer, C.N., Eyckmans, J., Seidman, C.E., Seidman, J.G., & Chen, C.S. (2024). Hypertrophic cardiomyopathy-associated mutations drive stromal activation via EGFR-mediated paracrine signaling. Science Advances, 10(42). https://doi.org/10.1126/sciadv.adi6927

Ewoldt, J. K., Wang, M.C., McLellan, M.A., Cloonan, P.E., Chopra, A., Gorham, J., Li, L., DeLaughter, D.M., Gao, X., Lee, J.H., Willcox J.A.L., Layton, O., Luu, R.J., Toepfer, C.N., Eyckmans, J., Seidman, C.E., Seidman, J.G., & Chen, C.S. (2024). Hypertrophic cardiomyopathy-associated mutations drive stromal activation via EGFR-mediated paracrine signaling. Science Advances, 10(42). https://doi.org/10.1126/sciadv.adi6927

Gagnon, K. A., Huang, J., Hix, O. T., Hui, V. W., Hinds, A., Bullitt, E., Eyckmans, J., Kotton, D. N., & Chen, C. S. (2024). Multicompartment duct platform to study epithelial–endothelial crosstalk associated with lung adenocarcinoma. APL Bioengineering, 8(2), 026126. https://doi.org/10.1063/5.0207228

Gagnon, K. A., Huang, J., Hix, O. T., Hui, V. W., Hinds, A., Bullitt, E., Eyckmans, J., Kotton, D. N., & Chen, C. S. (2024). Multicompartment duct platform to study epithelial–endothelial crosstalk associated with lung adenocarcinoma. APL Bioengineering, 8(2), 026126. https://doi.org/10.1063/5.0207228

Galie, P. A., Pogoda, K., Tran, K. A., Cēbers, A., & Janmey, P. A. (2024). Magnetoelastic Elastomers and Hydrogels for Studies of Mechanobiology. In B. Doudin, M. Coey, & A. Cēbers (Eds.), Magnetic Microhydrodynamics: An Emerging Research Field (pp. 143-156). Springer International Publishing. https://doi.org/10.1007/978-3-031-58376-6_11

Galie, P. A., Pogoda, K., Tran, K. A., Cēbers, A., & Janmey, P. A. (2024). Magnetoelastic Elastomers and Hydrogels for Studies of Mechanobiology. In B. Doudin, M. Coey, & A. Cēbers (Eds.), Magnetic Microhydrodynamics: An Emerging Research Field (pp. 143-156). Springer International Publishing. https://doi.org/10.1007/978-3-031-58376-6_11

Guo, J., Jiang, H., Schuftan, D., Moreno, J. D., Ramahdita, G., Aryan, L., Bhagavan, D., Silva, J., & Huebsch, N. (2024). Substrate mechanics unveil early structural and functional pathology in iPSC micro-tissue models of hypertrophic cardiomyopathy. iScience, 27(6). https://doi.org/10.1016/j.isci.2024.109954

Guo, J., Jiang, H., Schuftan, D., Moreno, J. D., Ramahdita, G., Aryan, L., Bhagavan, D., Silva, J., & Huebsch, N. (2024). Substrate mechanics unveil early structural and functional pathology in iPSC micro-tissue models of hypertrophic cardiomyopathy. iScience, 27(6). https://doi.org/10.1016/j.isci.2024.109954

Gupta, K., Llewellyn, J., Roberts, E., Liu, C., Naji, A., Assoian, R. K., & Wells, R. G. (2024). The biliary atresia susceptibility gene, EFEMP1, regulates extrahepatic bile duct elastic fiber formation and mechanics. JHEP Reports, 101215. https://doi.org/https://doi.org/10.1016/j.jhepr.2024.101215

Gupta, K., Llewellyn, J., Roberts, E., Liu, C., Naji, A., Assoian, R. K., & Wells, R. G. (2024). The biliary atresia susceptibility gene, EFEMP1, regulates extrahepatic bile duct elastic fiber formation and mechanics. JHEP Reports, 101215. https://doi.org/https://doi.org/10.1016/j.jhepr.2024.101215

Indana, D., Zakharov, A., Lim, Y., Dunn, A. R., Bhutani, N., Shenoy, V. B., & Chaudhuri, O. (2024). Lumen expansion is initially driven by apical actin polymerization followed by osmotic pressure in a human epiblast model. Cell Stem Cell, 31(5), 640-656.e648. https://doi.org/10.1016/j.stem.2024.03.016

Indana, D., Zakharov, A., Lim, Y., Dunn, A. R., Bhutani, N., Shenoy, V. B., & Chaudhuri, O. (2024). Lumen expansion is initially driven by apical actin polymerization followed by osmotic pressure in a human epiblast model. Cell Stem Cell, 31(5), 640-656.e648. https://doi.org/10.1016/j.stem.2024.03.016

Kant, A., Guo, Z., Vinayak, V., Neguembor, M. V., Li, W. S., Agrawal, V., Pujadas, E., Almassalha, L., Backman, V., Lakadamyali, M., Cosma, M. P., & Shenoy, V. B. (2024). Active transcription and epigenetic reactions synergistically regulate meso-scale genomic organization. Nature Communications, 15(1), 4338. https://doi.org/10.1038/s41467-024-48698-z

Kant, A., Guo, Z., Vinayak, V., Neguembor, M. V., Li, W. S., Agrawal, V., Pujadas, E., Almassalha, L., Backman, V., Lakadamyali, M., Cosma, M. P., & Shenoy, V. B. (2024). Active transcription and epigenetic reactions synergistically regulate meso-scale genomic organization. Nature Communications, 15(1), 4338. https://doi.org/10.1038/s41467-024-48698-z

Kurtaliaj, I., Hoppe, E. D., Huang, Y., Ju, D., Sandler, J. A., Yoon, D., Smith, L. J., Betancur, S. T., Effiong, L., Gardner, T., Tedesco, L., Desai, S., Birman, V., Levine, W. N., Genin, G. M., & Thomopoulos, S. Python tooth–inspired fixation device for enhanced rotator cuff repair. Science Advances, 10(26), eadl5270. https://doi.org/10.1126/sciadv.adl5270

Kurtaliaj, I., Hoppe, E. D., Huang, Y., Ju, D., Sandler, J. A., Yoon, D., Smith, L. J., Betancur, S. T., Effiong, L., Gardner, T., Tedesco, L., Desai, S., Birman, V., Levine, W. N., Genin, G. M., & Thomopoulos, S. Python tooth–inspired fixation device for enhanced rotator cuff repair. Science Advances, 10(26), eadl5270. https://doi.org/10.1126/sciadv.adl5270

Li, L., Griebel, M. E., Uroz, M., Bubli, S. Y., Gagnon, K. A., Trappmann, B., Baker, B. M., Eyckmans, J., & Chen, C. S. (2024). A Protein‐Adsorbent Hydrogel with Tunable Stiffness for Tissue Culture Demonstrates Matrix‐Dependent Stiffness Responses. Advanced Functional Materials, 2309567. https://doi.org/10.1002/adfm.202309567

Li, L., Griebel, M. E., Uroz, M., Bubli, S. Y., Gagnon, K. A., Trappmann, B., Baker, B. M., Eyckmans, J., & Chen, C. S. (2024). A Protein‐Adsorbent Hydrogel with Tunable Stiffness for Tissue Culture Demonstrates Matrix‐Dependent Stiffness Responses. Advanced Functional Materials, 2309567. https://doi.org/10.1002/adfm.202309567

Moheimani, H., Stealey, S., Neal, S., Ferchichi, E., Zhang, J., Foston, M., Setton, L. A., Genin, G. M., Huebsch, N., & Zustiak, S. P. (2024). Tunable Viscoelasticity of Alginate Hydrogels via Serial Autoclaving. Advanced Healthcare Materials, 2401550. https://doi.org/https://doi.org/10.1002/adhm.202401550

Moheimani, H., Stealey, S., Neal, S., Ferchichi, E., Zhang, J., Foston, M., Setton, L. A., Genin, G. M., Huebsch, N., & Zustiak, S. P. (2024). Tunable Viscoelasticity of Alginate Hydrogels via Serial Autoclaving. Advanced Healthcare Materials, 2401550. https://doi.org/10.1002/adhm.202401550

Mora-Boza, A., Mulero-Russe, A., Di Caprio, N., Burdick, J. A., O’Neill, E., Singh, A., & García, A. J. (2024). Facile photopatterning of perfusable microchannels in hydrogels for microphysiological systems. Nature Protocols. https://doi.org/10.1038/s41596-024-01041-8

Mora-Boza, A., Mulero-Russe, A., Di Caprio, N., Burdick, J. A., O’Neill, E., Singh, A., & García, A. J. (2024). Facile photopatterning of perfusable microchannels in hydrogels for microphysiological systems. Nature Protocols. https://doi.org/10.1038/s41596-024-01041-8

Pardo, A., Gomez‐Florit, M., Davidson, M. D., Özgen Öztürk‐Öncel, M., Domingues, R. M., Burdick, J. A., & Gomes, M. E. (2024). Hierarchical Design of Tissue‐Mimetic Fibrillar Hydrogel Scaffolds. Advanced Healthcare Materials, 2303167. https://doi.org/10.1002/adhm.202303167

Pardo, A., Gomez‐Florit, M., Davidson, M. D., Özgen Öztürk‐Öncel, M., Domingues, R. M., Burdick, J. A., & Gomes, M. E.(2024). Hierarchical Design of Tissue‐Mimetic Fibrillar Hydrogel Scaffolds. Advanced Healthcare Materials, 2303167. https://doi.org/10.1002/adhm.202303167

Riffe, M. B., Davidson, M. D., Seymour, G., Dhand, A. P., Cooke, M. E., Zlotnick, H. M., McLeod, R. R., & Burdick, J. A. (2024). Multi‐Material Volumetric Additive Manufacturing of Hydrogels Using Gelatin as A Sacrificial Network And 3d Suspension Bath. Advanced Materials, 2309026. https://doi.org/10.1002/adma.202309026

Riffe, M. B., Davidson, M. D., Seymour, G., Dhand, A. P., Cooke, M. E., Zlotnick, H. M., McLeod, R. R., & Burdick, J. A. (2024). Multi‐Material Volumetric Additive Manufacturing of Hydrogels Using Gelatin as A Sacrificial Network And 3d Suspension Bath. Advanced Materials, 2309026. https://doi.org/10.1002/adma.202309026

Simmons, D. W., Malayath, G., Schuftan, D. R., Guo, J., Oguntuyo, K., Ramahdita, G., Sun, Y., Jordan, S. D., Munsell, M. K., Kandalaft, B., Pear, M., Rentschler, S. L., & Huebsch, N. (2024). Engineered tissue geometry and Plakophilin-2 regulate electrophysiology of human iPSC-derived cardiomyocytes. APL bioengineering, 8(1). https://doi.org/10.1063/5.0160677

Simmons, D. W., Malayath, G., Schuftan, D. R., Guo, J., Oguntuyo, K., Ramahdita, G., Sun, Y., Jordan, S. D., Munsell, M. K., Kandalaft, B., Pear, M., Rentschler, S. L., & Huebsch, N. (2024). Engineered tissue geometry and Plakophilin-2 regulate electrophysiology of human iPSC-derived cardiomyocytes. APL bioengineering, 8(1). https://doi.org/10.1063/5.0160677

Tobin, M. P., Pfeifer, C. R., Zhu, P. K., Hayes, B. H., Wang, M., Vashisth, M., Xia, Y., Phan, S. H., Belt, S. A., Irianto, J., & Discher, D. E. (2023). Differences in cell shape, motility, and growth reflect chromosomal number variations that can be visualized with live-cell ChReporters. Molecular Biology of the Cell, 34(13), br19. https://doi.org/10.1091/mbc.E23-06-0207

Tobin, M. P., Pfeifer, C. R., Zhu, P. K., Hayes, B. H., Wang, M., Vashisth, M., Xia, Y., Phan, S. H., Belt, S. A., Irianto, J., & Discher, D. E. (2023). Differences in cell shape, motility, and growth reflect chromosomal number variations that can be visualized with live-cell ChReporters. Molecular Biology of the Cell, 34(13), br19. https://doi.org/10.1091/mbc.E23-06-0207

Warzoha, R. J., Wilson, A. A., Donovan, B. F., Clark, A., Cheng, X., An, L., & Feng, G. (2024). Measurements of Thermal Resistance Across Buried Interfaces with Frequency-Domain Thermoreflectance and Microscale Confinement. ACS Applied Materials & Interfaces. https://doi.org/10.1021/acsami.4c05258

Warzoha, R. J., Wilson, A. A., Donovan, B. F., Clark, A., Cheng, X., An, L., & Feng, G. (2024). Measurements of Thermal Resistance Across Buried Interfaces with Frequency-Domain Thermoreflectance and Microscale Confinement. ACS Applied Materials & Interfaces. https://doi.org/10.1021/acsami.4c05258

Xu, K. L., Di Caprio, N., Fallahi, H., Dehghany, M., Davidson, M. D., Laforest, L., Cheung, B. C., Zhang, Y., Wu, M., Shenoy, V., Han, L., Mauck, R. L., & Burdick, J. A. (2024). Microinterfaces in biopolymer-based bicontinuous hydrogels guide rapid 3D cell migration. Nature Communications, 15(1), 2766. https://doi.org/10.1038/s41467-024-46774-y

Xu, K. L., Di Caprio, N., Fallahi, H., Dehghany, M., Davidson, M. D., Laforest, L., Cheung, B. C., Zhang, Y., Wu, M., Shenoy, V., Han, L., Mauck, R. L., & Burdick, J. A. (2024). Microinterfaces in biopolymer-based bicontinuous hydrogels guide rapid 3D cell migration. Nature Communications, 15(1), 2766. https://doi.org/10.1038/s41467-024-46774-y

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