CEMB Faculty Publications
Ayariga, J. A., Huang, H., & Dean, D. (2022). Decellularized avian cartilage, a promising alternative for human cartilage tissue regeneration. Materials, 15 (5). https://doi.org/10.3390/ma15051974
Ayariga, J. A., Huang, H., & Dean, D. (2022). Decellularized avian cartilage, a promising alternative for human cartilage tissue regeneration. Materials, 15 (5). https://doi.org/10.3390/ma15051974
Basu, D., Codjoe, J. M., Veley, K. M., & Haswell, E. S. (2022). The Mechanosensitive ion channel msl10 modulates susceptibility to Pseudomonas syringae in Arabidopsis thaliana. Molecular Plant-Microbe Interations. https://doi.org/10.1094/MPMI-08-21-0207-FI
Basu, D., Codjoe, J. M., Veley, K. M., & Haswell, E. S. (2022). The Mechanosensitive ion channel msl10 modulates susceptibility to Pseudomonas syringae in Arabidopsis thaliana. Molecular Plant-Microbe Interations. https://doi.org/10.1094/MPMI-08-21-0207-FI
Bose, S., Noerr, P. S., Gopinathan, A., Gopinath, A., & Dasbiswas, K. (2022). Collective states of active particles with elastic dipolar interactions. ArXiv. https://doi.org/10.48550/arxiv.2202.10431
Bose, S., Noerr, P. S., Gopinathan, A., Gopinath, A., & Dasbiswas, K. (2022). Collective states of active particles with elastic dipolar interactions. ArXiv. https://doi.org/10.48550/arxiv.2202.10431
Chen, X., Chen, D., Ban, E., Toussaint, K. C., Janmey, P. A., Wells, R. G., & Shenoy, V. B. (2022). Glycosaminoglycans modulate long-range mechanical communication between cells in collagen networks. Proceedings of the National Academy of Sciences, 119(15). https://doi.org/10.1073/PNAS.2116718119
Chen, X., Chen, D., Ban, E., Toussaint, K. C., Janmey, P. A., Wells, R. G., & Shenoy, V. B. (2022). Glycosaminoglycans modulate long-range mechanical communication between cells in collagen networks. Proceedings of the National Academy of Sciences, 119(15). https://doi.org/10.1073/PNAS.2116718119
Clark, A. T., Marchfield, D., Cao, Z., Dang, T., Tang, N., Gilbert, D., Corbin, E. A., Buchanan, K. S., & Cheng, X. M. (2022). The effect of polymer stiffness on magnetization reversal of magnetorheological elastomers. APL Materials, 10(4), 041106. https://doi.org/10.1063/5.0086761
Das, S. L., Sutherland, B. P., Lejeune, E., Eyckmans, J., & Chen, C. S. (2022). Mechanical response of cardiac microtissues to acute localized injury. American Journal of Physiology-Heart and Circulatory Physiology. https://doi.org/10.1152/AJPHEART.00305.2022
Di Caprio, N., & Burdick, J. A. (2022). Engineered Biomaterials to Guide Spheroid Formation, Function, and Fabrication into 3D Tissue Constructs. Acta Biomaterialia. https://doi.org/10.1016/j.actbio.2022.09.052
Di Caprio, N., & Burdick, J. A. (2022). Engineered Biomaterials to Guide Spheroid Formation, Function, and Fabrication into 3D Tissue Constructs. Acta Biomaterialia. https://doi.org/10.1016/j.actbio.2022.09.052
Dooling, L. J., Saini, K., Anlaş, A. A., & Discher, D. E. (2022). Tissue mechanics coevolves with fibrillar matrisomes in healthy and fibrotic tissues. Matrix Biology. https://doi.org/10.1016/J.MATBIO.2022.06.006
Du, Y., Polacheck, W. J., & Wells, R. G. (2022). Bile duct-on-a-chip. In R. M. (Ed.), Organ-on-a-Chip. Methods in Molecular Biology (pp. 57–68). Humana, New York, NY. https://doi.org/10.1007/978-1-0716-1693-2_4
Du, Y., Polacheck, W. J., & Wells, R. G. (2022). Bile duct-on-a-chip. In R. M. (Ed.), Organ-on-a-Chip. Methods in Molecular Biology (pp. 57–68). Humana, New York, NY. https://doi.org/10.1007/978-1-0716-1693-2_4
Du, Y., Polacheck, W. J., & Wells, R. G. (2022). Bile Duct-on-a-Chip. Methods in Molecular Biology, 2373, 57–68. https://doi.org/10.1007/978-1-0716-1693-2_4
Gardini, L., Woody, M. S., Kashchuk, A. v., Goldman, Y. E., Ostap, E. M., & Capitanio, M. (2022). High-Speed Optical Traps Address Dynamics of Processive and Non-Processive Molecular Motors. Methods in Molecular Biology (Clifton, N.J.), 2478, 513–557. https://doi.org/10.1007/978-1-0716-2229-2_19
Guo, K., Huang, C., Miao, Y., Cosgrove, D. J., & Hsia, K. J. (2022). Leaf morphogenesis: the multifaceted roles of mechanics. Molecular Plant. https://doi.org/10.1016/J.MOLP.2022.05.015
Heo, S.-J., Thakur, S., Chen, X., Loebel, C., Xia, B., McBeath, R., Burdick, J. A., Shenoy, V. B., Mauck, R. L., & Lakadamyali, M. (2022). Aberrant chromatin reorganization in cells from diseased fibrous connective tissue in response to altered chemomechanical cues. Nature Biomedical Engineering 2022, 1–15. https://doi.org/10.1038/s41551-022-00910-5
Heo, S.-J., Thakur, S., Chen, X., Loebel, C., Xia, B., Mcbeath, R., Burdick, J. A., Shenoy, V. B., Mauck, R. L., Lakadamyali, M.(2022). Chemo-mechanical cues modulate nano-scale chromatin organization in healthy and diseased connective tissue cells. Nature Biomedical Engineering, 2021.04.27.441596. https://doi.org/10.1101/2021.04.27.441596
Heo, S.-J., Thakur, S., Chen, X., Loebel, C., Xia, B., Mcbeath, R., Burdick, J. A., Shenoy, V. B., Mauck, R. L., Lakadamyali, M. (2022). Chemo-mechanical cues modulate nano-scale chromatin organization in healthy and diseased connective tissue cells. Nature Biomedical Engineering, (in press).
Isomursu, A., Park, K.-Y., Hou, J., Cheng, B., Mathieu, M., Shamsan, G. A., Fuller, B., Kasim, J., Mahmoodi, M. M., Lu, T. J., Genin, G. M., Xu, F., Lin, M., Distefano, M. D., Ivaska, J., & Odde, D. J. (2022). Directed cell migration towards softer environments. Nature Materials 2022, 1–10. https://doi.org/10.1038/s41563-022-01294-2
Jiang, S., Alisafaei, F., Huang, Y.-Y., Hong, Y., Peng, X., Qu, C., Puapatanakul, P., Jain, S., Miner, J. H., Genin, G. M., & Suleiman, H. Y. (2022). An ex vivo culture model of kidney podocyte injury reveals mechanosensitive, synaptopodin-templating, sarcomere-like structures. Science Advances, 8(35), 31. https://doi.org/10.1126/SCIADV.ABN6027
Jing, H., Korasick, D. A., Emenecker, R. J., Morffy, N., Wilkinson, E. G., Powers, S. K., & Strader, L. C. (2022). Regulation of AUXIN RESPONSE FACTOR condensation and nucleo-cytoplasmic partitioning. Nature Communications, 13(4015). https://doi.org/10.1038/s41467-022-31628-2
Kolel-Veetil, M. K., Kant, A., Shenoy, V. B., & Buehler, M. J. (2022). SARS-CoV-2 Infection-Of Music and Mechanics of Its Spikes! A Perspective. ACS Nano. https://doi.org/10.1021/ACSNANO.1C11491
Lakadamyali, M. (2022). Single nucleosome tracking to study chromatin plasticity. Current Opinion in Cell Biology, 74, 23–28. https://doi.org/10.1016/J.CEB.2021.12.005
Lakadamyali, M. (2022). Single nucleosome tracking to study chromatin plasticity. Current Opinion in Cell Biology, 74, 23–28. https://doi.org/10.1016/J.CEB.2021.12.005
Loebel, C., Saleh, A. M., Jacobson, K. R., Daniels, R., Mauck, R. L., Calve, S., & Burdick, J. A. (2022). Metabolic labeling of secreted matrix to investigate cell–material interactions in tissue engineering and mechanobiology. Nature Protocols, 17(3), 618–648. https://doi.org/10.1038/s41596-021-00652-9
Loebel, C., Saleh, A. M., Jacobson, K. R., Daniels, R., Mauck, R. L., Calve, S., & Burdick, J. A. (2022). Metabolic labeling of secreted matrix to investigate cell–material interactions in tissue engineering and mechanobiology. Nature Protocols, 17(3), 618–648. https://doi.org/10.1038/s41596-021-00652-9
Michas, C., Karakan, M. Ç., Nautiyal, P., Seidman, J. G., Seidman, C. E., Agarwal, A., Ekinci, K., Eyckmans, J., White, A. E., & Chen, C. S. (2022). Engineering a living cardiac pump on a chip using high-precision fabrication. Science Advances, 8(16), 3791. https://doi.org/10.1126/SCIADV.ABM3791
Miller, K., Strychalski, W., Nickaeen, M., Carlsson, A., & Haswell, E. S. (2022). In vitro experiments and kinetic models of Arabidopsis pollen hydration mechanics show that MSL8 is not a simple tension-gated osmoregulator. Current Biology. https://doi.org/10.1016/J.CUB.2022.05.033
Noerr, P. S., Golnaraghi, F., Gopinathan, A., & Dasbiswas, K. (2022). Optimal mechanical interactions direct multicellular network formation on elastic substrates. https://doi.org/10.48550/arxiv.2205.14088
Park, J. Y., Mani, S., Clair, G., Olson, H. M., Paurus, V. L., Ansong, C. K., Blundell, C., Young, R., Kanter, J., Gordon, S., Yi, A. Y., Mainigi, M., & Huh, D. D. (2022). A microphysiological model of human trophoblast invasion during implantation. Nature Communications 2022 13:1, 13(1), 1–18. https://doi.org/10.1038/s41467-022-28663-4
Park, J. Y., Mani, S., Clair, G., Olson, H. M., Paurus, V. L., Ansong, C. K., Blundell, C., Young, R., Kanter, J., Gordon, S., Yi, A. Y., Mainigi, M., & Huh, D. D. (2022). A microphysiological model of human trophoblast invasion during implantation. Nature Communications, 13(1), 1–18. https://doi.org/10.1038/s41467-022-28663-4
Park, J. Y., Mani, S., Clair, G., Olson, H. M., Paurus, V. L., Ansong, C. K., Blundell, C., Young, R., Kanter, J., Gordon, S., Yi, A. Y., Mainigi, M., & Huh, D. D. (2022). A microphysiological model of human trophoblast invasion during implantation. Nature Communications, 13(1), 1–18. https://doi.org/10.1038/s41467-022-28663-4
Patteson, A. E., Asp, M. E., & Janmey, P. A. (2022). Materials science and mechanosensitivity of living matter. Applied Physics Reviews, 9(1), 011320. https://doi.org/10.1063/5.0071648
Patteson, A. E., Asp, M. E., & Janmey, P. A. (2022). Materials science and mechanosensitivity of living matter. Applied Physics Reviews, 9(1), 011320. https://doi.org/10.1063/5.0071648
Patteson, A. E., Asp, M. E., & Janmey, P. A. (2022). Materials science and mechanosensitivity of living matter. Applied Physics Reviews, 9(1), 011320. https://doi.org/10.1063/5.0071648
Peng, X., Liu, Y., He, W., Hoppe, E. D., Zhou, L., Xin, F., Haswell, E. S., Pickard, B. G., Genin, G. M., & Lu, T. J. (2022). Acoustic radiation force on a long cylinder,and potential sound transduction by tomato trichomes. Biophysical Journal. https://doi.org/10.1016/J.BPJ.2022.08.038
Pfeifer, C. R., Tobin, M. P., Cho, S., Vashisth, M., Dooling, L. J., Vazquez, L. L., Ricci-De Lucca, E. G., Simon, K. T., & Discher, D. E. (2022). Gaussian curvature dilutes the nuclear lamina, favoring nuclear rupture, especially at high strain rate. Nucleus, 13(1), 129–143. https://www.tandfonline.com/doi/full/10.1080/19491034.2022.2045726
Pfeifer, C. R., Tobin, M. P., Cho, S., Vashisth, M., Dooling, L. J., Vazquez, L. L., Ricci-De Lucca, E. G., Simon, K. T., & Discher, D. E. (2022). Gaussian curvature dilutes the nuclear lamina, favoring nuclear rupture, especially at high strain rate. Nucleus, 13(1), 129–143. https://www.tandfonline.com/doi/full/10.1080/19491034.2022.2045726
Pfeifer, C. R., Tobin, M. P., Cho, S., Vashisth, M., Dooling, L. J., Vazquez, L. L., Ricci-De Lucca, E. G., Simon, K. T., & Discher, D. E. (2022). Gaussian curvature dilutes the nuclear lamina, favoring nuclear rupture, especially at high strain rate. Nucleus, 13(1), 129–143. https://doi.org/10.1080/19491034.2022.2045726
Prendergast, M. E., & Burdick, J. A. (2022). Computational modeling and experimental characterization of extrusion printing into suspension baths. Advanced Healthcare Materials, 11(7), 2101679. https://doi.org/10.1002/ADHM.202101679
Prendergast, M. E., & Burdick, J. A. (2022). Computational modeling and experimental characterization of extrusion printing into suspension baths. Advanced Healthcare Materials, 11(7), 2101679. https://doi.org/10.1002/ADHM.202101679
Qazi, T. H., Blatchley, M. R., Davidson, M. D., Yavitt, F. M., Cooke, M. E., Anseth, K. S., & Burdick, J. A. (2022). Programming hydrogels to probe spatiotemporal cell biology. Cell Stem Cell. https://doi.org/10.1016/J.STEM.2022.03.013
Qazi, T. H., Blatchley, M. R., Davidson, M. D., Yavitt, F. M., Cooke, M. E., Anseth, K. S., & Burdick, J. A. (2022). Programming hydrogels to probe spatiotemporal cell biology. Cell Stem Cell. https://doi.org/10.1016/J.STEM.2022.03.013
Qazi, T. H., Muir, V. G., & Burdick, J. A. (2022). Methods to characterize granular hydrogel rheological properties, porosity, and cell invasion. ACS Biomaterials Science & Engineering, 8(4), 1427–1442. https://doi.org/10.1021/ACSBIOMATERIALS.1C01440
Qazi, T. H., Muir, V. G., & Burdick, J. A. (2022). Methods to characterize granular hydrogel rheological properties, porosity, and cell invasion. ACS Biomaterials Science & Engineering, 8(4), 1427–1442. https://doi.org/10.1021/ACSBIOMATERIALS.1C01440
Qazi, T. H., Wu, J., Muir, V. G., Weintraub, S., Gullbrand, S. E., Lee, D., Issadore, D., & Burdick, J. A. (2022). Anisotropic rod-shaped particles influence injectable granular hydrogel properties and cell invasion. Advanced Materials, 34(12), 2109194. https://doi.org/10.1002/ADMA.202109194
Qazi, T. H., Wu, J., Muir, V. G., Weintraub, S., Gullbrand, S. E., Lee, D., Issadore, D., & Burdick, J. A. (2022). Anisotropic rod-shaped particles influence injectable granular hydrogel properties and cell invasion. Advanced Materials, 34(12), 2109194. https://doi.org/10.1002/ADMA.202109194
Qu, C., Roth, R., Puapatanakul, P., Loitman, C., Hammad, D., Genin, G. M., Miner, J. H., & Suleiman, H. Y. (2022). Three-dimensional visualization of the podocyte actin network using integrated membrane extraction, electron microscopy, and machine learning. Journal of the American Society of Nephrology, 33(1), 155–173. https://doi.org/10.1681/ASN.2021020182
Qu, C., Roth, R., Puapatanakul, P., Loitman, C., Hammad, D., Genin, G. M., Miner, J. H., & Suleiman, H. Y. (2022). Three-dimensional visualization of the podocyte actin network using integrated membrane extraction, electron microscopy, and machine learning. Journal of the American Society of Nephrology, 33(1), 155–173. https://doi.org/10.1681/ASN.2021020182
Radin, I., Richardson, R. A., & Haswell, E. S. (2022). Moss PIEZO homologs have a conserved structure, are ubiquitously expressed, and do not affect general vacuole function. Plant Signaling and Behavior, 17(1).
Radin, I., Richardson, R. A., & Haswell, E. S. (2022). Moss PIEZO homologs have a conserved structure, are ubiquitously expressed, and do not affect general vacuole function. Plant Signaling and Behavior, 17(1).
Roeder, A. H. K., Otegui, M. S., Dixit, R., Anderson, C. T., Faulkner, C., Zhang, Y., Harrison, M. J., Kirchhelle, C., Goshima, G., Coate, J. E., Doyle, J. J., Hamant, O., Sugimoto, K., Dolan, L., Meyer, H., Ehrhardt, D. W., Boudaoud, A., & Messina, C. (2022). Fifteen compelling open questions in plant cell biology. The Plant Cell, 34(1), 72–102. https://doi.org/10.1093/PLCELL/KOAB225
Sarpangala, N., & Gopinathan, A. (2022). Cargo surface fluidity can reduce inter-motor mechanical interference, promote load-sharing and enhance processivity in teams of molecular motors. PLOS Computational Biology, 18(6), e1010217. https://doi.org/10.1371/journal.pcbi.1010217
Simmons, D. W., & Huebsch, N. (2022). iPSC-Derived Micro-Heart Muscle for Medium-Throughput Pharmacology and Pharmacogenomic Studies. 111–131. https://doi.org/10.1007/978-1-0716-2261-2_8
von Kleeck, R., Castagnino, P., & Assoian, R. K. (2022). Progerin mislocalizes myocardin-related transcription factor in Hutchinson–Guilford Progeria syndrome. Vascular Biology, 4(1), 1–10. https://doi.org/10.1530/vb-21-0018
Wang, M., Ivanovska, I., Vashisth, M., & Discher, D. E. (2022). Nuclear mechanoprotection: From tissue atlases as blueprints to distinctive regulation of nuclear lamins. APL Bioengineering, 6(2), 021504. https://doi.org/10.1063/5.0080392
Wang, Y., Coomey, J., Miller, K., Jensen, G. S., & Haswell, E. S. (2022). Interactions between a mechanosensitive channel and cell wall integrity signaling influence pollen germination in Arabidopsis thaliana. Journal of Experimental Botany, 73(5), 1533–1545. https://doi.org/10.1093/JXB/ERAB525
Wang, Y., Coomey, J., Miller, K., Jensen, G. S., & Haswell, E. S. (2022). Interactions between a mechanosensitive channel and cell wall integrity signaling influence pollen germination in Arabidopsis thaliana. Journal of Experimental Botany, 73(5), 1533–1545. https://doi.org/10.1093/JXB/ERAB525
